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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs61790955 chr3:153665546 G/A 0 406 15.17 16.77 0.23 KM Plot
LGG rs61790956 chr3:153666030 C/T 0 406 15.18 16.47 0.23 KM Plot
LGG rs61790957 chr3:153667247 G/T 0 407 15.17 16.47 0.23 KM Plot
LGG rs61790958 chr3:153671072 T/C 0 407 15.17 16.47 0.23 KM Plot
LGG rs61790959 chr3:153671941 T/A 0 406 15.17 16.47 0.23 KM Plot
LGG rs61792260 chr3:153672045 C/T 0 406 15.17 16.47 0.23 KM Plot
LGG rs61792261 chr3:153672436 G/A 0 406 15.17 16.47 0.23 KM Plot
LGG rs61792262 chr3:153672503 C/G 0 406 15.17 16.47 0.23 KM Plot
LGG rs61792263 chr3:153673153 T/G 0 404 15.15 16.47 0.23 KM Plot
LGG rs61792265 chr3:153674811 T/C 0 405 15.15 16.77 0.23 KM Plot
LGG rs61792266 chr3:153675581 C/G 0 405 15.15 16.77 0.23 KM Plot
LGG rs61792267 chr3:153676980 A/G 0 405 15.15 16.77 0.23 KM Plot
LGG rs61792268 chr3:153678249 A/T 0 405 15.15 16.77 0.23 KM Plot
LGG rs61792269 chr3:153678633 C/T 0 405 15.15 16.77 0.23 KM Plot
LGG rs61792270 chr3:153678648 T/C 0 405 15.15 16.77 0.23 KM Plot